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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TFF2, trefoil factor 2
Sequence ID:NM_005423
Entrez Gene ID:7032
Ensembl ID:ENSG00000160181

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:21q22.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:21: 43766469 - 43771087

NM_005423 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
131994376646843766654
2003464376759443767740
3474964376998943770138
4977174377098743771207

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5184770Full LengthBC032820trefoil factor 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005414  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_005423 NP_005414 Q03403 Trefoil

Related Sequences

 
mRNAGenPeptSwissProt
BC032820 AAH32820 Q03403
HQ448369 ADQ32849  
X51698 CAA35995 Q03403

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TFF2 NP_005414 M.musculus Tff2 21785 Gene Info NP_033389 81
R.norvegicus Tff2 116592   NP_446296 79

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta