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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SETD1A, SET domain containing 1A
Sequence ID:NM_014712
Entrez Gene ID:9739
Ensembl ID:ENSG00000099381

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:16p11.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:16: 30968614 - 30995981

 Exon Info From UCSC:
NM_014712

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4156088IncompleteBC027450SET domain containing 1A
5737791IncompleteBC035795SET domain containing 1A

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_055527  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_014712 NP_055527 O15047 EC 2.1.1.43 RRM_1
SET

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC027450 AAH27450 O15047 EC 2.1.1.43
BC035795 AAH35795 O15047 EC 2.1.1.43
AB002337 BAA20797 O15047 EC 2.1.1.43

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SETD1A NP_055527 M.musculus Setd1a 233904 Gene Info NP_821172 91

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)