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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. MMP9, matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)
Sequence ID:NM_004994
RefSeqGene ID:NG_011468
Entrez Gene ID:4318
Ensembl ID:ENSG00000100985

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
INTERVERTEBRAL DISC DISEASEASPN
CILP
COL11A1
COL9A2
COL9A3
THBS2
METAPHYSEAL ANADYSPLASIA 2 

Cytogenetic Location (from UniGene)

Cytogenetic Location:20q11.2-q13.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:20: 44637546 - 44645195

 Exon Info From UCSC:
NM_004994

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4054882Full LengthBC006093matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_004985  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_004994 NP_004985 P14780 EC 3.4.24.35 fn2
Hemopexin
Peptidase_M10
PG_binding_1
PT

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
J05070 AAA51539 P14780 EC 3.4.24.35
BC006093 AAH06093 P14780 EC 3.4.24.35
DQ896791 ABM87790    
EU176415 ABW03866    
HQ874462 AEA49029 F2YBS6  
AK313137 BAG35956 P14780 EC 3.4.24.35
AK298246 BAH12743 B7Z507  
AK301446 BAH13483 B7Z747  
AK302530 BAH13736 B7Z7V0  
AK303080 BAH13895 B7Z8A9  
AK316145 BAH14516 B7Z8A9  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens MMP9 NP_004985 R.norvegicus Mmp9 81687   NP_112317 75
M.musculus Mmp9 17395 Gene Info NP_038627 75
A.thaliana AT2G45040 819111   NP_182030 44

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta