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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PRAF2, PRA1 domain family, member 2
Sequence ID:NM_007213
Entrez Gene ID:11230
Ensembl ID:ENSG00000243279

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:Xp11.23Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:X: 48928817 - 48931662

NM_007213 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
38504892881948929666
85110684893009148930308
106912634893146748931661

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4297902Full LengthBC021213PRA1 domain family, member 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_009144  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_007213 NP_009144 O60831 PRA1

Related Sequences

 
mRNAGenPeptSwissProt
BC021213 AAH21213 O60831
AK315374 BAG37767 O60831
AK023433 BAG51191 B3KN29
AJ005896 CAA06753 O60831
CR457023 CAG33304 O60831

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PRAF2 NP_009144 M.musculus Praf2 54637 Gene Info NP_613068 91

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)