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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. CLEC1A, C-type lectin domain family 1, member A
Sequence ID:NM_016511
Entrez Gene ID:51267
Ensembl ID:ENSG00000150048

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:12p13.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 10223081 - 10251602

NM_016511 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1510451022308110224111
104611641022589110226009
116513161022810210228253
131714931023383510234011
149415921024172210241820
159317911025140610251604

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5178017Full LengthBC039072C-type lectin domain family 1, member A
30337675Full LengthBC067746C-type lectin domain family 1, member A

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_057595  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_016511 NP_057595 Q8NC01 Lectin_C

Related Sequences

 
mRNAGenPeptSwissProt
AF200949 AAF36830 Q8NC01
BC039072 AAH39072 Q8NC01
BC067746 AAH67746 Q8NC01
AY358587 AAQ88950 Q8NC01
DQ892440 ABM83366  
DQ895651 ABM86577  
AK075114 BAC11410 Q8NC01
AK291584 BAF84273 A8K6B9
AK091989 BAG52458 B3KRP6
AK300979 BAG62601 B4DV89

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CLEC1A NP_057595 R.norvegicus Clec1a 500337   NP_001102723 72
M.musculus Clec1a 243653 Gene Info NP_780735 70

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)