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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. EXOSC8, exosome component 8
Sequence ID:NM_181503
Entrez Gene ID:11340
Ensembl ID:ENSG00000120699

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, pancreas, pancreatic islet, parathyroid, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:13q13.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:13: 37576404 - 37583537

 Exon Info From UCSC:
NM_181503

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4808747Full LengthBC020773exosome component 8

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_852480  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_181503 NP_852480 Q96B26 RNase_PH
RNase_PH_C

Related Sequences

 
mRNAGenPeptSwissProt
AF025438 AAC39558 Q96B26
BC020773 AAH20773 Q96B26
DQ893134 ABM84060  
DQ896414 ABM87413  
AL050353 CAI46226 Q5JXM0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens EXOSC8 NP_852480 R.norvegicus Exosc8 295050   NP_001099902 93
M.musculus Exosc8 69639 Gene Info NP_001157042 92
A.gambiae AgaP_AGAP012402 1280314   XP_320154 48
S.pombe SPBC17D1.03c 2540189   NP_596385 40
A.thaliana AT1G60080 842303   NP_176216 38

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)