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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. DHX40, DEAH (Asp-Glu-Ala-His) box polypeptide 40
Sequence ID:NM_024612
NM_001166301
Entrez Gene ID:79665
Ensembl ID:ENSG00000108406

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:17q23.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 57642990 - 57685713

 Exon Info From UCSC:
NM_024612
NM_001166301

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4822080Full LengthBC024187DEAH (Asp-Glu-Ala-His) box polypeptide 40

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_078888  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001166301 NP_001159773      
NM_024612 NP_078888 Q8IX18 EC 3.6.4.13 Helicase_C
HA2
DUF1605

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF260270 AAF70326 Q8IX18 EC 3.6.4.13
BC024187 AAH24187 Q8IX18 EC 3.6.4.13
AF319521 AAK32122 Q8IX18 EC 3.6.4.13
AF461690 AAN77932 Q8IX18 EC 3.6.4.13
DQ890909 ABM81835    
DQ894060 ABM84986    
AK025713 BAB15226 Q8IX18 EC 3.6.4.13
AK091334 BAG52339 B3KRC7  
AK095681 BAG53107 Q8IX18 EC 3.6.4.13
AK299151 BAG61200 B4DR88  
AL832510 CAI46197 Q8IX18 EC 3.6.4.13
XM_003846599 XP_003846647    

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens DHX40 NP_078888 M.musculus Dhx40 67487 Gene Info NP_080467 98
R.norvegicus Dhx40 287595   NP_001005873 98

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)