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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. VNN2, vanin 2
Sequence ID:NM_001242350
NM_004665
NM_078488
NR_034173
NR_034174
Entrez Gene ID:8875
Ensembl ID:ENSG00000112303

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6q23-q24Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 133065008 - 133079029

 Exon Info From UCSC:
NM_004665
NM_078488

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8991861Full LengthBC126145vanin 2
8991863Full LengthBC126147vanin 2
5784133IncompleteBC064641vanin 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_511043  NP_004656  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001242350 NP_001229279      
NM_004665 NP_004656 O95498 EC 3.5.1.92 CN_hydrolase
NM_078488 NP_511043     CN_hydrolase

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC126145 AAI26146 O95498 EC 3.5.1.92
BC126147 AAI26148 O95498 EC 3.5.1.92
HQ258282 ADR83036    
HQ258449 ADR83203    
D89974 BAA82525 O95498 EC 3.5.1.92
AB026705 BAB61019 O95498 EC 3.5.1.92
AK290908 BAF83597 O95498 EC 3.5.1.92
AK292125 BAF84814 A8K7W0  
AB435062 BAG30934 O95498 EC 3.5.1.92
AB435063 BAG30935 O95498 EC 3.5.1.92
AB435064 BAG30936 O95498 EC 3.5.1.92
AB435065 BAG30937 O95498 EC 3.5.1.92
AK298719 BAG60874 B4DQB2  
AJ132100 CAA10569 O95498 EC 3.5.1.92

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens VNN2 NP_004656 A.gambiae AgaP_AGAP010733 1272534   XP_311447 31
D.melanogaster vanin-like 31551   NP_572297 31
D.melanogaster CG32751 318189   NP_727068 31

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)