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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CHPT1, choline phosphotransferase 1
Sequence ID:NM_020244
Entrez Gene ID:56994
Ensembl ID:ENSG00000111666

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:12q

Chromosomal Position (from UCSC)

Chromosomal Position:12: 102091845 - 102122800

NM_020244 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1496102091416102091911
497644102107867102108014
645786102108281102108422
787871102110505102110589
8721003102113900102114031
10041162102116945102117103
11631288102117499102117624
12891399102120071102120181
14001566102122678102122844

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4696613Full LengthBC020819choline phosphotransferase 1
6473945Full LengthBC050429choline phosphotransferase 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_064629  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_020244 NP_064629 Q8WUD6 EC 2.7.8.2 CDP-OH_P_transf

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF047431 AAD44019 Q8WUD6 EC 2.7.8.2
AF195623 AAF87947 Q8WUD6 EC 2.7.8.2
AF195624 AAF87948 Q8WUD6 EC 2.7.8.2
BC020819 AAH20819 Q8WUD6 EC 2.7.8.2
BC050429 AAH50429 Q8WUD6 EC 2.7.8.2
AF111803 AAL39005 Q8WUD6 EC 2.7.8.2
AY166717 AAN86122 Q8WUD6 EC 2.7.8.2
AY166718 AAN86123 Q8WUD6 EC 2.7.8.2
AY280609 AAP34412 Q8WUD6 EC 2.7.8.2
AY280610 AAP34413 Q8WUD6 EC 2.7.8.2
AY294627 AAP37157 Q8WUD6 EC 2.7.8.2
AK075211 BAG52084 Q8WUD6 EC 2.7.8.2
AK093067 BAG52647 B3KS85  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CHPT1 NP_064629 M.musculus Chpt1 212862 Gene Info NP_001140162 89
R.norvegicus Chpt1 362866   NP_001007751 89

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)