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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. INO80, INO80 homolog (S. cerevisiae)
Sequence ID:NM_017553
NM_032196
RefSeqGene ID:NG_017163
Entrez Gene ID:54617
Ensembl ID:ENSG00000128908

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:15q15.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:15: 41271090 - 41408340


Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9007241Full LengthBC146785INO80 homolog (S. cerevisiae)
4525096IncompleteBC057299INO80 complex homolog 1 (S. cerevisiae)
5109549IncompleteBC046115INO80 complex homolog 1 (S. cerevisiae)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_060023  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_017553 NP_060023 Q9ULG1 EC 3.6.4.12 SNF2_N
Helicase_C

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC146785 AAI46786 Q9ULG1 EC 3.6.4.12
AB033085 BAA86573 Q9ULG1 EC 3.6.4.12
AK002176 BAA92122 Q9NUK2  
AK024777 BAB14997 Q9H7A1  
AK290371 BAF83060 A8K2V6  
AL137280 CAB70675 Q9ULG1 EC 3.6.4.12

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens INO80 NP_060023 M.musculus Ino80 68142 Gene Info NP_080850 97
R.norvegicus Ino80 296084   XP_230473 97
A.gambiae AgaP_AGAP005035 1274851   XP_313902 54
D.melanogaster Ino80 42314   NP_732413 50

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)