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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PTDSS1, phosphatidylserine synthase 1
Sequence ID:NM_014754
Entrez Gene ID:9791
Ensembl ID:ENSG00000156471

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:8q22Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:8: 97274129 - 97346329

 Exon Info From UCSC:
NM_014754

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2961075Full LengthBC002376phosphatidylserine synthase 1
3509418Full LengthBC004192phosphatidylserine synthase 1
3634879Full LengthBC004390phosphatidylserine synthase 1
3836412IncompleteBC004502phosphatidylserine synthase 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_055569  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_014754 NP_055569 P48651 EC 2.7.8.29 PSS

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC002376 AAH02376 Q9BUQ5  
BC004192 AAH04192 P48651 EC 2.7.8.29
BC004390 AAH04390 P48651 EC 2.7.8.29
BC004502 AAH04502 Q9BSY0  
DQ891825 ABM82751    
DQ895012 ABM85938    
D14694 BAA03520 P48651 EC 2.7.8.29
AK293036 BAF85725 A8KAH1  
AK293513 BAG56996 B4DE85  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PTDSS1 NP_055569 M.musculus Ptdss1 19210 Gene Info NP_032985 97
R.norvegicus Ptdss1 314553   NP_001012113 97
A.gambiae AgaP_AGAP012146 1280531   XP_320381 55
D.melanogaster CG4825 40281   NP_649242 55
C.elegans pssy-1 181211   NP_509673 49
C.elegans pssy-2 176776   NP_499786 48
P.falciparum MAL13P1.335 813902   XP_001350379 31

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)