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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ZMYND11, Zinc finger, MYND-type containing 11
Sequence ID:NM_006624
NM_001202466
NM_001202465
NM_001202464
NM_212479
NM_001202468
NM_001202467
RefSeqGene ID:NG_029960
Entrez Gene ID:10771
Ensembl ID:ENSG00000015171

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, placenta, pooled tissue, prostate, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:10p14Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:10: 180741 - 298520

 Exon Info From UCSC:
NM_006624
NM_212479

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5171494Full LengthBC034784zinc finger, MYND domain containing 11
6186814Full LengthBC091489zinc finger, MYND domain containing 11
3950009IncompleteBC012586zinc finger, MYND domain containing 11

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_006615  NP_997644  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001202464 NP_001189393    
NM_001202465 NP_001189394    
NM_001202466 NP_001189395    
NM_001202467 NP_001189396    
NM_001202468 NP_001189397    
NM_006624 NP_006615 Q15326 Bromodomain
PHD
PWWP
zf-MYND
NM_212479 NP_997644 Q5VUI0 Bromodomain
PHD
PWWP

Related Sequences

 
mRNAGenPeptSwissProt
BC012586 AAH12586 Q6PJR5
BC034784 AAH34784 Q8N4B3
BC091489 AAH91489 Q5BJG6
AY732489 AAV33128 Q5UGI2
DQ335452 ABC72408 Q15326
DQ335453 ABC72409 Q15326
DQ335454 ABC72410 Q15326
DQ335455 ABC72411 Q15326
DQ891317 ABM82243  
DQ894501 ABM85427  
AK312570 BAG35465 Q15326
AK294469 BAH11779 B7Z293
AK294781 BAH11882 B7Z2J6
AK296427 BAH12348 B7Z3W2
AK296518 BAH12377 B7Z3Z1
X86098 CAA60052 Q15326

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ZMYND11 NP_006615 R.norvegicus Zmynd11 291259   NP_976242 98
M.musculus Zmynd11 66505 Gene Info NP_653099 97

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)