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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SLC27A5, solute carrier family 27 (fatty acid transporter), member 5
Sequence ID:NM_012254
Entrez Gene ID:10998
Ensembl ID:ENSG00000083807

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:19q13.43Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:19: 59018031 - 59023780

NM_012254 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
143725900969959010057
3735035901015159010281
5046015901048959010586
6028005901085859011056
8018915901170559011795
89210865901187859012072
108712115901265259012776
121213705902121359021371
137115805902208759022296
158123785902263459023431

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100015855Full LengthBC148807solute carrier family 27 (fatty acid transporter), member 5
100015134BC146387solute carrier family 27 (fatty acid transporter), member 5

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_036386  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_012254 NP_036386 Q9Y2P5 EC 6.2.1.7 AMP-binding

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF064255 AAD29444 Q9Y2P5 EC 6.2.1.7
BC146387 AAI46388    
BC148807 AAI48808    
AB208931 BAD92168 Q59H28  
AK123036 BAG53858 Q9Y2P5 EC 6.2.1.7
AK298446 BAG60663 B4DPQ1  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SLC27A5 NP_036386 R.norvegicus Slc27a5 79111   NP_077057 72
M.musculus Slc27a5 26459 Gene Info NP_033538 72

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)