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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SLC50A1, solute carrier family 50 (sugar transporter), member 1
Sequence ID:NM_001122837
NM_001122839
NM_018845
Entrez Gene ID:55974
Ensembl ID:ENSG00000169241

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1q22Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 155108325 - 155111327

 Exon Info From UCSC:
NM_001122837
NM_001122839
NM_018845

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3896154Full LengthBC009621recombination activating gene 1 activating protein 1
4076256Full LengthBC005943recombination activating gene 1 activating protein 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_061333  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001122837 NP_001116309    
NM_001122839 NP_001116311    
NM_018845 NP_061333 Q9BRV3 MtN3_slv

Related Sequences

 
mRNAGenPeptSwissProt
AF126023 AAF17232 Q9BRV3
AF126024 AAF17233 Q9BRV3
BC005943 AAH05943 Q9BRV3
BC009621 AAH09621 Q9BRV3
HQ447165 ADQ31652  
AK289551 BAF82240 Q9BRV3
CR457148 CAG33429 Q9BRV3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SLC50A1 NP_061333 R.norvegicus Slc50a1 295245   NP_001099915 80
M.musculus Slc50a1 19729 Gene Info NP_033083 80
C.elegans K02D7.5 186875   NP_499901 34
C.elegans C06G8.1 177972   NP_502000 30
A.thaliana AT5G50790 835151   NP_199892 30
A.gambiae AgaP_AGAP005236 1274944   XP_314140 29
D.melanogaster slv 35773   NP_477383 29
C.elegans C54F6.4 183804   NP_504939 26

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)