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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. MLST8, MTOR associated protein, LST8 homolog (S. cerevisiae)
Sequence ID:NM_001199173
NM_001199174
NM_001199175
NM_022372
Entrez Gene ID:64223
Ensembl ID:ENSG00000167965

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:16p13.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:16: 2256604 - 2259398

Transcript StartTranscript EndChromosomal Start Chromosomal End
16422554492255512
6524822560312256214
24930022563582256409
30146322564972256659
46453922570352257110
54069222571932257345
69381722582102258334
81898122584502258613
982163922587592259416

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3454025Full LengthBC001313G protein beta subunit-like
3910883Full LengthBC017119G protein beta subunit-like
5926090Full LengthBC052292G protein beta subunit-like
6168345Full LengthBC088354G protein beta subunit-like

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_071767  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001199173 NP_001186102    
NM_001199174 NP_001186103    
NM_001199175 NP_001186104    
NM_022372 NP_071767 Q9BVC4 WD40

Related Sequences

 
mRNAGenPeptSwissProt
AF195883 AAF04308 Q9BVC4
BC001313 AAH01313 Q9BVC4
BC017119 AAH17119 Q9BVC4
BC052292 AAH52292 Q9BVC4
BC088354 AAH88354 Q9BVC4
AY223837 AAO73410 Q9BVC4
DQ891611 ABM82537  
DQ894803 ABM85729  
EU176591 ABW03392  
AK022227 BAB13990 Q9BVC4
AK021536 BAG51036 Q9BVC4
AK302201 BAG63562 Q9BVC4
AK304390 BAG65225 B4E2R3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens MLST8 NP_001186102 M.musculus Mlst8 56716 Gene Info NP_064372 98
R.norvegicus Mlst8 64226   NP_071799 98
A.gambiae AgaP_AGAP001036 1270528   XP_560261 54
D.melanogaster CG3004 31903   NP_572572 51
S.cerevisiae LST8 855726   NP_014392 50
S.pombe pop3 2540645   NP_595682 47
A.thaliana AT3G18140 821339   NP_188442 47
N.crassa NCU04281 3877225   XP_961071 45

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)