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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ARID1B, AT rich interactive domain 1B (SWI1-like)
Sequence ID:NM_017519
NM_020732
RefSeqGene ID:NG_032093
Entrez Gene ID:57492
Ensembl ID:ENSG00000049618

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
MENTAL RETARDATION, AUTOSOMAL DOMINANT 12 

Cytogenetic Location (from UniGene)

Cytogenetic Location:6q25.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:Unknown

 Exon Info From UCSC:
NM_017519
NM_020732

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3896731IncompleteBC009543AT rich interactive domain 1B (SWI1-like)

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_017519 NP_059989 Q8NFD5  
NM_020732 NP_065783    

Related Sequences

 
mRNAGenPeptSwissProt
AF259792 AAG36928 Q8NFD5
AF468300 AAL76077 Q8NFD5
AF521671 AAN03447 Q8NFD5
AF253515 AAN70985 Q8NFD5
AB033061 BAA86549 Q8NFD5
AK000921 BAA91426 Q9NWF5
AK074180 BAB85006 Q8TEE4
AK302356 BAG63682 B4DYC0
Y08266 CAA69592 Q8NFD5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ARID1B NP_059989 M.musculus Arid1b 239985 Gene Info NP_001078824 93
R.norvegicus Arid1b 282546   NP_750843 93
A.gambiae AgaP_AGAP001786 1281332   XP_321283 34
C.elegans let-526 3565337   NP_491562 30

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)