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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ANKRD49, Ankyrin repeat domain 49
Sequence ID:NM_017704
Entrez Gene ID:54851
Ensembl ID:ENSG00000168876

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11q21Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 94227156 - 94232153

NM_017704 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1499422715294227200
503979422976994230116
39819019423123694232739

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4655138Full LengthBC017798ankyrin repeat domain 49

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_060174  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_017704 NP_060174 Q8WVL7 Ank

Related Sequences

 
mRNAGenPeptSwissProt
BC017798 AAH17798 Q8WVL7
AF025354 AAK60412 Q8WVL7
EU831563 ACE86482  
EU831476 ACE87163  
HQ447670 ADQ32155  
AK000196 BAA91003 Q8WVL7
AL833977 CAD38821 Q8WVL7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ANKRD49 NP_060174 M.musculus Ankrd49 56503 Gene Info NP_062657 88
R.norvegicus Ankrd49 315434   NP_001119755 86
D.melanogaster l(2)35Be 34874   NP_609735 46
C.elegans F26F4.12 175656   NP_498030 42
A.gambiae AgaP_AGAP007813 1278145   XP_317687 40

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)