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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. C8orf42, chromosome 8 open reading frame 42
Sequence ID:NM_001256113
NM_175075
Entrez Gene ID:157695
Ensembl ID:ENSG00000180190

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:8p23.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:8: 439804 - 442677

Transcript StartTranscript EndChromosomal Start Chromosomal End
21099441646442743
11001203444493444596
12041885494649495330

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9020235Full LengthBC136248chromosome 8 open reading frame 42
9020236Full LengthBC136249chromosome 8 open reading frame 42
4512944IncompleteBC033779chromosome 8 open reading frame 42

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001256113 NP_001243042    
NM_175075 NP_778250 Q86YL5  

Related Sequences

 
mRNAGenPeptSwissProt
BC136248 AAI36249 Q86YL5
BC136249 AAI36250 Q86YL5
AY194292 AAO23974 Q86YL5
FJ381685 ACJ10204 B6VF03

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens C8orf42 NP_778250 M.musculus 2610019F03Rik 72148 Gene Info NP_776105 78
R.norvegicus LOC498662 498662   NP_001094261 76

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)