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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. LTBP3, latent transforming growth factor beta binding protein 3
Sequence ID:NM_001130144
NM_001164266
NM_021070
RefSeqGene ID:NG_016437
Entrez Gene ID:4054
Ensembl ID:ENSG00000168056

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Associated Diseases (from OMIM)

DiseaseOther Genes
TOOTH AGENESIS, SELECTIVE, 6 

Cytogenetic Location (from UniGene)

Cytogenetic Location:11q13.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 65318596 - 65319875

 Exon Info From UCSC:
NM_001130144
NM_001164266
NM_021070

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9020264Full LengthBC136277latent transforming growth factor beta binding protein 3
3349420IncompleteBC008761latent transforming growth factor beta binding protein 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_066548  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001130144 NP_001123616 Q9NS15  
NM_001164266 NP_001157738    
NM_021070 NP_066548   EGF
TB
TIL
EGF_CA
EGF_2

Related Sequences

 
mRNAGenPeptSwissProt
AF011407 AAB64201 Q9NS15
AF135960 AAF62352 Q9NS15
AF135961 AAF62353 Q9P0Z7
BC008761 AAH08761 Q9NS15
BC136277 AAI36278 B9EG76
AF318354 AAL55861 Q8WYU6
AK024477 BAB15767 Q9NS15
AK124524 BAG54046 B3KW84
AK298858 BAG60980 B4DQL8
AK299351 BAG61347 B4DRN5
AL117551 CAB55988 Q9NS15

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens LTBP3 NP_001123616 M.musculus Ltbp3 16998 Gene Info NP_032546 94
R.norvegicus Ltbp3 83838   XP_002728905 94

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)