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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. MRPL9, mitochondrial ribosomal protein L9
Sequence ID:NM_031420
Entrez Gene ID:65005
Ensembl ID:ENSG00000143436

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, pineal gland, placenta, pooled tissue, prostate, retina, skin, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:1q21Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 151732380 - 151735970

NM_031420 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
25557151732124151732656
558641151733291151733374
642743151733926151734027
744794151734580151734630
795919151734851151734975
9201076151735465151735621
10771314151735802151736039

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3937599Full LengthBC004517mitochondrial ribosomal protein L9

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_113608  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_031420 NP_113608 Q9BYD2 Ribosomal_L9_N

Related Sequences

 
mRNAGenPeptSwissProt
BC004517 AAH04517 Q9BYD2
AB049636 BAB40841 Q9BYD2
AK315459 BAG37846 Q9BYD2
AK293401 BAG56908 B4DDZ7
AK300668 BAG62353 B4DUJ1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens MRPL9 NP_113608 M.musculus Mrpl9 78523 Gene Info NP_084392 84
R.norvegicus mrpl9 310653   NP_001007697 84

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)