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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. EFNA5, ephrin-A5
Sequence ID:NM_001962
Entrez Gene ID:1946
Ensembl ID:ENSG00000184349

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5q21Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 106713904 - 106715117

NM_001962 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
24488106712590106717076
44894569106722935106723015
45704635106723406106723471
46364928106762917106763209
49295335107006189107006595

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30915365Full LengthBC075054ephrin-A5
30915581Full LengthBC075055ephrin-A5

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001953  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001962 NP_001953 P52803 Ephrin

Related Sequences

 
mRNAGenPeptSwissProt
U26403 AAB60377 P52803
BC075054 AAH75054 P52803
BC075055 AAH75055 P52803

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens EFNA5 NP_001953 M.musculus Efna5 13640 Gene Info NP_997537 99
R.norvegicus Efna5 116683   NP_446355 99

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)