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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. STXBP1, syntaxin binding protein 1
Sequence ID:NM_001032221
NM_003165
RefSeqGene ID:NG_016623
Entrez Gene ID:6812
Ensembl ID:ENSG00000136854

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, kidney, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Associated Diseases (from OMIM)

DiseaseOther Genes
EPILEPTIC ENCEPHALOPATHY, EARLY INFANTILE, 4 

Cytogenetic Location (from UniGene)

Cytogenetic Location:9q34.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:9: 130425593 - 130454978

 Exon Info From UCSC:
NM_001032221
NM_003165

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4868854Full LengthBC015749syntaxin binding protein 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003156  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001032221 NP_001027392 Q68CM6
P61764
 
NM_003165 NP_003156   Sec1

Related Sequences

 
mRNAGenPeptSwissProt
AF004562 AAC39688 Q68CM6
P61764
AF004563 AAC39689 P61764
BC015749 AAH15749 Q68CM6
P61764
DQ895426 ABM86352  
EU176334 ABW03785  
D63851 BAA19483 Q68CM6
P61764
AB209180 BAD92417 Q59GC9
AK293984 BAH11641 B7Z1V5
AK295154 BAH11993 B7Z2V7
AK295802 BAH12190 B7Z3F4
Y12723 CAA73255 Q68CM6
P61764

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens STXBP1 NP_001027392 R.norvegicus Stxbp1 25558   NP_037170 100
M.musculus Stxbp1 20910 Gene Info NP_033321 100
A.gambiae AgaP_AGAP003023 1272929   XP_311854 65
D.melanogaster Rop 38493   NP_523916 65
C.elegans unc-18 181030   NP_001024606 59

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)