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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. MRPL50, mitochondrial ribosomal protein L50
Sequence ID:NM_019051
Entrez Gene ID:54534
Ensembl ID:ENSG00000136897

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, salivary gland, skin, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:9q31.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:9: 104152248 - 104160896

NM_019051 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
30913104152248104153131
9141050104160782104160918

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4749199Full LengthBC032008mitochondrial ribosomal protein L50

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_019051 NP_061924 Q8N5N7  

Related Sequences

 
mRNAGenPeptSwissProt
BC032008 AAH32008 Q8N5N7
JF432491 ADZ15708  
AK000500 BAA91207 Q8N5N7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens MRPL50 NP_061924 M.musculus Mrpl50 28028 Gene Info NP_848718 78
R.norvegicus Mrpl50 362517   NP_001102135 77

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)