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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SEPT4, septin 4
Sequence ID:NM_001198713
NM_001256782
NM_001256822
NM_004574
NM_080415
NM_080416
NR_037155
NM_080417
RefSeqGene ID:NG_029570
Entrez Gene ID:5414
Ensembl ID:ENSG00000108387

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17q22Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 56597617 - 56606631

 Exon Info From UCSC:
NM_004574
NM_080415
NM_080416

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4811662Full LengthBC018056septin 4
4792645IncompleteBC018055septin 4
40115845IncompleteBC128515septin 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_004565  NP_536340  NP_536341  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001198713 NP_001185642    
NM_001256782 NP_001243711    
NM_001256822 NP_001243751    
NM_004574 NP_004565 O43236 Septin
NM_080415 NP_536340   Septin
NM_080416 NP_536341   Septin

Related Sequences

 
mRNAGenPeptSwissProt
AF035811 AAB88512 O43236
AF073312 AAC25673 O43236
U88829 AAD00653 O43236
U88870 AAD00657 O43236
AF176379 AAG45673 O43236
BC018056 AAH18056 O43236
DQ892336 ABM83262  
DQ895541 ABM86467  
D89278 BAB46922 O43236
AB002110 BAB70694 Q96Q97
AB008753 BAB70695 O43236
AK314528 BAG37122 B2RB75
AK315396 BAG37789 O43236
AK091065 BAG52275 B3KR63
AK094579 BAG52891 O43236
AK294094 BAG57432 O43236
AK295527 BAG58440 B4DIC8
AK301914 BAG63338 O43236
AK302146 BAG63517 O43236
CR457111 CAG33392 O43236

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SEPT4 NP_004565 R.norvegicus Sept4 287606   NP_001011893 97
M.musculus Sept4 18952 Gene Info NP_035259 93
A.gambiae AgaP_AGAP000768 1272359   XP_311306 61
D.melanogaster Sep4 32646   NP_728007 58
N.crassa NCU03795 3877369   XP_961184 51
S.cerevisiae CDC12 856507   NP_011975 44
S.pombe spn4 2542193   NP_593566 43

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)