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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SPA17, sperm autoantigenic protein 17
Sequence ID:NM_017425
Entrez Gene ID:53340
Ensembl ID:ENSG00000064199

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11q24.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 124543739 - 124564687

NM_017425 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1109124543739124543847
110290124545133124545313
291361124551284124551354
362448124561591124561677
449935124564198124564684

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5171849Full LengthBC032457sperm autoantigenic protein 17
3961471IncompleteBC019224sperm autoantigenic protein 17

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_059121  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_017425 NP_059121 Q15506 IQ
RIIa

Related Sequences

 
mRNAGenPeptSwissProt
BC019224 AAH19224 Q05D07
BC032457 AAH32457 Q15506
AF334735 AAK20878 Q15506
AK311806 BAG34749 Q15506

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SPA17 NP_059121 R.norvegicus Spa17 85244   NP_445934 74
M.musculus Spa17 20686 Gene Info NP_035579 73

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)