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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PCTP, Phosphatidylcholine transfer protein
Sequence ID:NM_001102402
NM_021213
Entrez Gene ID:58488
Ensembl ID:ENSG00000141179

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17q21-q24Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 53828355 - 53853813

 Exon Info From UCSC:
NM_001102402
NM_021213

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4575824Full LengthBC012084phosphatidylcholine transfer protein
4026343IncompleteBC005112phosphatidylcholine transfer protein

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_067036  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001102402 NP_001095872    
NM_021213 NP_067036 Q9UKL6 START

Related Sequences

 
mRNAGenPeptSwissProt
AF151638 AAF02536 Q549N3
Q9UKL6
AF114430 AAF08345 Q9UKL6
BC005112 AAH05112 Q9UKL6
BC012084 AAH12084 Q549N3
Q9UKL6
AF087857 AAP97167 Q549N3
Q9UKL6
JF432438 ADZ15655  
AK314509 BAG37109 Q549N3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PCTP NP_067036 M.musculus Pctp 18559 Gene Info NP_032822 82
R.norvegicus Pctp 29510   NP_058921 80

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)