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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SRPK2, SRSF protein kinase 2
Sequence ID:NM_182691
NM_182692
Entrez Gene ID:6733
Ensembl ID:ENSG00000135250

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, skin, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:7q22-q31.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:7: 104757742 - 104784513

 Exon Info From UCSC:
NM_182691
NM_182692

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4778251Full LengthBC035214SFRS protein kinase 2
5265599Full LengthBC068547SFRS protein kinase 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_872633  NP_872634  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_182691 NP_872633 P78362 EC 2.7.11.1 Pkinase
NM_182692 NP_872634     Pkinase

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
U88666 AAC05299 P78362 EC 2.7.11.1
BC035214 AAH35214 P78362 EC 2.7.11.1
BC068547 AAH68547 P78362 EC 2.7.11.1
AY354201 AAQ63886 P78362 EC 2.7.11.1
DQ891337 ABM82263    
DQ894519 ABM85445    

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SRPK2 NP_872633 M.musculus Srpk2 20817 Gene Info NP_033300 95
R.norvegicus Srpk2 296753   NP_001100045 94
A.thaliana SRPK4 824469   NP_566977 59
A.thaliana AT5G22840 832347   NP_197675 52
A.gambiae AgaP_AGAP005322 1276029   XP_001688633 51
A.thaliana AT3G44850 823619   NP_190071 51
D.melanogaster SRPK 36706   NP_725458 50
P.falciparum PFC0105w 814339   XP_001351098 38

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)