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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. HSD17B13, hydroxysteroid (17-beta) dehydrogenase 13
Sequence ID:NM_001136230
NM_178135
Entrez Gene ID:345275
Ensembl ID:ENSG00000170509

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4q22.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:4: 88224946 - 88244027

 Exon Info From UCSC:
NM_001136230
NM_178135

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8327771Full LengthBC112303hydroxysteroid (17-beta) dehydrogenase 13
8327773Full LengthBC112305hydroxysteroid (17-beta) dehydrogenase 13

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_835236  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001136230 NP_001129702    
NM_178135 NP_835236 Q7Z5P4 adh_short

Related Sequences

 
mRNAGenPeptSwissProt
BC112303 AAI12304 Q7Z5P4
BC112305 AAI12306 Q7Z5P4
AY186249 AAO72313 Q7Z5P4
AY186250 AAO72314 Q7Z5P4
AY268355 AAP42289 Q7Z5P4
AY358575 AAQ88938 Q7Z5P4
HQ258364 ADR83118  
AB073347 BAD38632 Q7Z5P4
AK292784 BAF85473 Q7Z5P4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens HSD17B13 NP_835236 R.norvegicus Hsd17b13 305150   NP_001009684 81
M.musculus Hsd17b13 243168 Gene Info NP_001156958 81

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)