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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. B3GALT6, UDP-Gal:betaGal beta 1,3-galactosyltransferase polypeptide 6
Sequence ID:NM_080605
RefSeqGene ID:NG_030007
Entrez Gene ID:126792
Ensembl ID:ENSG00000176022

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1p36.33Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 1170030 - 1170420

NM_080605 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1279011676281170417

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100063970Full LengthBC160034UDP-Gal:betaGal beta 1,3-galactosyltransferase polypeptide 6
3635074IncompleteBC041621UDP-Gal:betaGal beta 1,3-galactosyltransferase polypeptide 6
3846772IncompleteBC015549UDP-Gal:betaGal beta 1,3-galactosyltransferase polypeptide 6
4814265IncompleteBC051719UDP-Gal:betaGal beta 1,3-galactosyltransferase polypeptide 6

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_542172  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_080605 NP_542172 Q96L58 EC 2.4.1.134 Galactosyl_T

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC051719 AAH51719 Q499Z2  
BC160034 AAI60034    

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens B3GALT6 NP_542172 R.norvegicus B3galt6 298690   NP_001100169 86
M.musculus B3galt6 117592 Gene Info NP_536693 85
C.elegans sqv-2 173635   NP_494394 44
A.thaliana AT4G21060 827853   NP_001154260 34

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)