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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TSHZ1, teashirt zinc finger homeobox 1
Sequence ID:NM_005786
RefSeqGene ID:NG_032047
Entrez Gene ID:10194
Ensembl ID:ENSG00000179981

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:18q22.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:18: 72994818 - 73001898

NM_005786 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
14687292273072923197
46949667299740273001899

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100062057Full LengthBC156588teashirt zinc finger homeobox 1
3844124IncompleteBC024152teashirt zinc finger homeobox 1
100015980BC152772teashirt zinc finger homeobox 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005777  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_005786 NP_005777   zf-C2H2

Related Sequences

 
mRNAGenPeptSwissProt
AF039698 AAC18047 Q6ZSZ6
BC024152 AAH24152 A7YF73
BC152772 AAI52773  
BC156588 AAI56589  
AK127042 BAC86800 Q6ZSZ6
AK223545 BAD97265 Q6ZSZ6
AB210042 BAE06124 Q6ZSZ6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TSHZ1 NP_005777 M.musculus Tshz1 110796 Gene Info NP_001074769 93
R.norvegicus Tshz1 307217   XP_225688 92

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)