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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. BARHL1, BarH-like homeobox 1
Sequence ID:NM_020064
Entrez Gene ID:56751
Ensembl ID:ENSG00000125492

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9q34Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:9: 135458184 - 135464909

NM_020064 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1658135457992135458649
659881135462715135462937
8821907135464614135465639

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9020948Full LengthBC136956BarH-like homeobox 1
9020961Full LengthBC136969BarH-like homeobox 1
9052955Full LengthBC144433BarH-like homeobox 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_064448  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_020064 NP_064448 Q9BZE3 Homeobox

Related Sequences

 
mRNAGenPeptSwissProt
AF325688 AAG50279 Q9BZE3
BC136956 AAI36957 Q9BZE3
BC136969 AAI36970 Q9BZE3
BC144433 AAI44434 B7ZMC8
AF321618 AAK52674 Q9BZE3
AK054797 BAB70807 Q9BZE3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens BARHL1 NP_064448 M.musculus Barhl1 54422 Gene Info NP_062319 98
R.norvegicus Barhl1 117232   NP_476450 98

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)