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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. UBQLN4, ubiquilin 4
Sequence ID:NM_020131
Entrez Gene ID:56893
Ensembl ID:ENSG00000160803

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:1q21Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 156005092 - 156023489

 Exon Info From UCSC:
NM_020131

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4214386Full LengthBC018403ubiquilin 4
6183942Full LengthBC063841ubiquilin 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_064516  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_020131 NP_064516 Q9NRR5 ubiquitin
UBA

Related Sequences

 
mRNAGenPeptSwissProt
AF113544 AAF19084 Q9NRR5
AF188240 AAF80171 Q9NRR5
BC006410 AAH06410 Q9NRR5
BC018403 AAH18403 Q9NRR5
BC063841 AAH63841 Q9NRR5
AB209566 BAD92803 Q59F94
AK314413 BAG37034 Q9NRR5
AK302895 BAG64068 B4DZF6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens UBQLN4 NP_064516 M.musculus Ubqln4 94232 Gene Info NP_277068 93
R.norvegicus Ubqln4 310633   NP_001101158 93

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)