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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. MRPL47, Mitochondrial ribosomal protein L47
Sequence ID:NM_020409
NM_177988
Entrez Gene ID:57129
Ensembl ID:ENSG00000136522

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3q26.33Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 179306618 - 179322411

 Exon Info From UCSC:
NM_020409
NM_177988

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3161966Full LengthBC021575mitochondrial ribosomal protein L47
5500168Full LengthBC032522mitochondrial ribosomal protein L47

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_817125  NP_065142  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_020409 NP_065142 Q9HD33 MRP-L47
NM_177988 NP_817125   MRP-L47

Related Sequences

 
mRNAGenPeptSwissProt
BC021575 AAH21575 Q9HD33
BC032522 AAH32522 Q9HD33
AY212270 AAO92749 Q9HD33

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens MRPL47 NP_065142 M.musculus Mrpl47 74600 Gene Info NP_083293 78
R.norvegicus Mrpl47 294963   NP_001032260 77
A.gambiae AgaP_AGAP002218 1269342   XP_307966 46
D.melanogaster Rlc1 41141   NP_788610 42

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)