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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. GCM1, glial cells missing homolog 1 (Drosophila)
Sequence ID:NM_003643
Entrez Gene ID:8521
Ensembl ID:ENSG00000137270

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6p12.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 52991761 - 53010510

NM_003643 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1920015299176152993743
200221305299560052995728
213122435299680452996916
224424965299886952999121
249727075301035553010565
270827805301355153013623

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40007164Full LengthBC096288glial cells missing homolog 1 (Drosophila)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003634  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_003643 NP_003634 Q9NP62 GCM

Related Sequences

 
mRNAGenPeptSwissProt
BC096288 AAH96288 Q9NP62
D88613 BAA13651 Q9NP62
AB026493 BAA77250 Q9NP62
AB041714 BAA94757 Q9NP62

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens GCM1 NP_003634 R.norvegicus Gcm1 29394   NP_058882 74
M.musculus Gcm1 14531 Gene Info NP_032129 74

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)