Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PRRX1, Paired related homeobox 1
Sequence ID:NM_006902
NM_022716
RefSeqGene ID:NG_031856
Entrez Gene ID:5396
Ensembl ID:ENSG00000116132

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
AGNATHIA-OTOCEPHALY COMPLEX 

Cytogenetic Location (from UniGene)

Cytogenetic Location:1q24Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 170633359 - 170705324

 Exon Info From UCSC:
NM_006902
NM_022716

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30915308Full LengthBC074993paired related homeobox 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_008833  NP_073207  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_006902 NP_008833   Homeobox
NM_022716 NP_073207 P54821 Homeobox
OAR

Related Sequences

 
mRNAGenPeptSwissProt
BC074993 AAH74993 P54821
EU446648 ABZ92177  
AB451463 BAG70277 P54821

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PRRX1 NP_073207 M.musculus Prrx1 18933 Gene Info NP_035257 100
R.norvegicus Prrx1 266813   NP_722543 100

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)