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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. POU2F1, POU class 2 homeobox 1
Sequence ID:NM_001198783
NM_001198786
NM_002697
NR_037163
Entrez Gene ID:5451
Ensembl ID:ENSG00000143190

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, skin, spleen, stem cell, stomach, synovium, testis, thymus, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:1q24.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 167190131 - 167385123


Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2966289Full LengthBC001664POU class 2 homeobox 1
3544378Full LengthBC003571POU class 2 homeobox 1
4622256Full LengthBC052274POU class 2 homeobox 1
3830953IncompleteBC007388POU class 2 homeobox 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002688  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001198783 NP_001185712    
NM_001198786 NP_001185715    
NM_002697 NP_002688 P14859 Homeobox
Pou

Related Sequences

 
mRNAGenPeptSwissProt
BC001664 AAH01664 P14859
BC003571 AAH03571 P14859
BC007388 AAH07388 P14859
BC052274 AAH52274 P14859
AY113189 AAM77920 P14859
AK091438 BAG52361 B3KRE9
AK302525 BAG63798 B4DYN6
AK303201 BAG64291 P14859
X13403 CAA31767 P14859

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens POU2F1 NP_002688 R.norvegicus Pou2f1 171068   NP_001094109 95
M.musculus Pou2f1 18986 Gene Info NP_945150 94

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)