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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PRDM9, PR domain containing 9
Sequence ID:NM_020227
Entrez Gene ID:56979
Ensembl ID:ENSG00000164256

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5p14Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 23522721 - 23528706

 Exon Info From UCSC:
NM_020227

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_064612  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_020227 NP_064612 Q9NQV7 EC 2.1.1.43 zf-C2H2

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF275816 AAF87242 Q9NQV7 EC 2.1.1.43
DQ388610 ABD47939 Q9NQV7 EC 2.1.1.43
GU216222 ADA71145 D2KI84  
GU216223 ADA71146 D2KI85  
AK301776 BAG63234 Q9NQV7 EC 2.1.1.43

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PRDM9 NP_064612 R.norvegicus Prdm9 365155   NP_001102373 80
M.musculus Prdm9 213389 Gene Info NP_659058 74

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)