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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. A1CF, APOBEC1 complementation factor
Sequence ID:NM_001198818
NM_001198819
NM_001198820
NM_014576
NM_138932
NM_138933
RefSeqGene ID:NG_029916
Entrez Gene ID:29974
Ensembl ID:ENSG00000148584

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:10q11.23Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:10: 52566444 - 52645387

 Exon Info From UCSC:
NM_014576
NM_138932
NM_138933

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9052716Full LengthBC144196APOBEC1 complementation factor
40146550Full LengthBC130519APOBEC1 complementation factor

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_055391  NP_620311  NP_620310  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001198818 NP_001185747    
NM_001198819 NP_001185748    
NM_001198820 NP_001185749    
NM_014576 NP_055391   RRM_1
NM_138932 NP_620310 Q9NQ94 RRM_1
NM_138933 NP_620311   RRM_1

Related Sequences

 
mRNAGenPeptSwissProt
AF209192 AAF34824 Q9NQ94
AF271789 AAF76221 Q9NQ94
AF271790 AAF76222 Q9NQ94
BC054873 AAH54873 Q7Z2U9
BC130519 AAI30520 Q9NQ94
BC144196 AAI44197 Q9NQ94
AK000324 BAA91086 Q9NQ94
AK291982 BAF84671 Q9NQ94
AK303801 BAG64755 B4E1E3
AJ272078 CAB94754 Q9NQ94
AJ272079 CAB94755 Q9NQ94

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens A1CF NP_001185747 M.musculus A1cf 69865 Gene Info NP_001074543 94
R.norvegicus A1cf 170912   NP_596891 94

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)