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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. RCAN1, regulator of calcineurin 1
Sequence ID:NM_004414
NM_203417
NM_203418
RefSeqGene ID:NG_007071
Entrez Gene ID:1827
Ensembl ID:ENSG00000159200

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:21q22.12Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:21: 35987058 - 35987169

 Exon Info From UCSC:
NM_004414
NM_203417
NM_203418

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3944959Full LengthBC002864regulator of calcineurin 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_981962  NP_004405  NP_981963  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_004414 NP_004405 P53805 Calcipressin
NM_203417 NP_981962   Calcipressin
NM_203418 NP_981963 Q6FGP2 Calcipressin

Related Sequences

 
mRNAGenPeptSwissProt
U28833 AAB81557 P53805
U85265 AAB84370 P53805
U85266 AAB84371 P53805
U85267 AAB84372 P53805
Q6FGP2
AF303449 AAG40774 Q9H2A1
BC002864 AAH02864 P53805
AF400429 AAK92478 P53805
BT007363 AAP36027 P53805
AY325903 AAP96743 P53805
HQ448344 ADQ32824  
AK131569 BAD18702 Q6ZMM3
AK092184 BAG52494 P53805
AK293293 BAH11486 B7Z1F0
AK299444 BAH13035 Q6FGP2
CR456878 CAG33159 P53805
CR542065 CAG46862 Q6FGP2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RCAN1 NP_004405 M.musculus Rcan1 54720 Gene Info NP_001075018 94
C.elegans rcn-1 175788   NP_498223 44

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)