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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. PGLYRP2, peptidoglycan recognition protein 2
Sequence ID:NM_052890
Entrez Gene ID:114770
Ensembl ID:ENSG00000161031

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:19p13.12Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:19: 15579456 - 15590264

NM_052890 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
231271557945815579562
1284251558044215580739
4266361558270015582910
63717071558634815587418
170819011559012115590314

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9020541Full LengthBC136551peptidoglycan recognition protein 2
9020542Full LengthBC136552peptidoglycan recognition protein 2
9052758Full LengthBC144238peptidoglycan recognition protein 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_443122  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_052890 NP_443122 Q96PD5 EC 3.5.1.28 Amidase_2

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC136551 AAI36552 Q96PD5 EC 3.5.1.28
BC136552 AAI36553 Q96PD5 EC 3.5.1.28
BC144238 AAI44239 B7ZM33  
AF384856 AAL05629 Q96PD5 EC 3.5.1.28
AY358156 AAQ88523 Q96PD5 EC 3.5.1.28
AK055882 BAB71034 Q96PD5 EC 3.5.1.28
AB073610 BAD38647 Q96PD5 EC 3.5.1.28
AK289415 BAF82104 A8K050  
AK292292 BAF84981 Q96PD5 EC 3.5.1.28

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PGLYRP2 NP_443122 M.musculus Pglyrp2 57757 Gene Info NP_067294 75
A.gambiae PGRPS1 1271702   XP_310547 40
D.melanogaster PGRP-SA 32099   NP_572727 40

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)