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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CACNA2D1, calcium channel, voltage-dependent, alpha 2/delta subunit 1
Sequence ID:NM_000722
RefSeqGene ID:NG_009358
Entrez Gene ID:781
Ensembl ID:ENSG00000153956

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7q21-q22Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:7: 81579556 - 81600405

 Exon Info From UCSC:
NM_000722

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40126019Full LengthBC117468calcium channel, voltage-dependent, alpha 2/delta subunit 1
40126021Full LengthBC117470calcium channel, voltage-dependent, alpha 2/delta subunit 1
6337847IncompleteBC051339calcium channel, voltage-dependent, alpha 2/delta subunit 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_000713  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_000722 NP_000713   VWA
Cache_1
VWA_N
VGCC_alpha2

Related Sequences

 
mRNAGenPeptSwissProt
M76559 AAA51903 P54289
BC117468 AAI17469 P54289
BC117470 AAI17471 P54289
AK299838 BAH13144 B7Z658

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CACNA2D1 NP_000713 M.musculus Cacna2d1 12293 Gene Info NP_001104314 97
R.norvegicus Cacna2d1 25399   NP_037051 96

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)