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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. IRX2, iroquois homeobox 2
Sequence ID:NM_001134222
NM_033267
Entrez Gene ID:153572
Ensembl ID:ENSG00000170561

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5p15.33Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 2746879 - 2751769

 Exon Info From UCSC:
NM_001134222
NM_033267

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6422941Full LengthBC065189iroquois homeobox 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_150366  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001134222 NP_001127694    
NM_033267 NP_150366 Q9BZI1 Homeobox

Related Sequences

 
mRNAGenPeptSwissProt
BC065189 AAH65189 Q9BZI1
AY335940 AAQ16546 Q9BZI1
AB188492 BAD37140 Q9BZI1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens IRX2 NP_001127694 R.norvegicus Irx2 306657   NP_001034594 93
M.musculus Irx2 16372 Gene Info NP_034704 92

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)