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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PECR, Peroxisomal trans-2-enoyl-CoA reductase
Sequence ID:NM_018441
Entrez Gene ID:55825
Ensembl ID:ENSG00000115425

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2q35Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 216903824 - 216946524

NM_018441 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1973216903110216904082
9741085216908626216908737
10861196216913985216914095
11971293216916171216916267
12941375216923617216923698
13761541216930034216930199
15421675216931107216931240
16761874216946340216946538

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3139219Full LengthBC002529peroxisomal trans-2-enoyl-CoA reductase

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_060911  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_018441 NP_060911 Q9BY49 EC 1.3.1.38 adh_short

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF232009 AAF69798 Q9BY49 EC 1.3.1.38
BC002529 AAH02529 Q9BY49 EC 1.3.1.38
AF212234 AAK14920 Q9BY49 EC 1.3.1.38
EU832727 ACE87059    
EU832649 ACE87740    
AK315795 BAG38139 Q9BY49 EC 1.3.1.38
AK296208 BAG58934 B4DJS2  
AJ250303 CAB89810 Q9BY49 EC 1.3.1.38
CR457145 CAG33426 Q9BY49 EC 1.3.1.38

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PECR NP_060911 M.musculus Pecr 111175 Gene Info NP_076012 73
R.norvegicus Pecr 113956   NP_579833 72
A.thaliana AT2G29260 817475   NP_180489 36

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)