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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. PEX7, peroxisomal biogenesis factor 7
Sequence ID:NM_000288
RefSeqGene ID:NG_008462
Entrez Gene ID:5191
Ensembl ID:ENSG00000112357

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6q23.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 137143759 - 137234744

NM_000288 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1232137143701137143932
233290137146351137146408
291441137147456137147606
442519137166752137166829
520628137167210137167318
629735137187764137187870
736849137191027137191140
850905137193335137193390
9061005137219279137219378
10061481137234595137235070

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3948721Full LengthBC006268peroxisomal biogenesis factor 7
5176358Full LengthBC031606peroxisomal biogenesis factor 7

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_000279  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_000288 NP_000279 Q6FGN1
O00628
WD40

Related Sequences

 
mRNAGenPeptSwissProt
U76560 AAB50556 Q6FGN1
O00628
U88871 AAC51238 Q6FGN1
O00628
BC006268 AAH06268 Q6FGN1
O00628
BC031606 AAH31606 C0H5X6
HQ447573 ADQ32059  
CR542054 CAG46851 Q6FGN1
O00628
CR542076 CAG46873 Q6FGN1
O00628

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PEX7 NP_000279 M.musculus Pex7 18634 Gene Info NP_032848 93
R.norvegicus Pex7 308718   NP_001029319 91
A.gambiae AgaP_AGAP006264 1276918   XP_001688840 50
A.thaliana PEX7 839800   NP_174220 46
D.melanogaster CG6486 38994   NP_001137914 46
N.crassa NCU07662 3878468   XP_962304 41
S.cerevisiae PEX7 851720   NP_010426 36

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)