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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TFB1M, transcription factor B1, mitochondrial
Sequence ID:NM_016020
RefSeqGene ID:NG_027528
Entrez Gene ID:51106
Ensembl ID:ENSG00000029639

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6q25.1-q25.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 155578796 - 155635618

NM_016020 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
6431155578790155579215
432559155581406155581533
560679155606291155606410
680831155618086155618237
832940155619610155619718
9411092155632321155632472
10931289155635429155635625

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4672440Full LengthBC017788transcription factor B1, mitochondrial
4041141IncompleteBC005183transcription factor B1, mitochondrial
4093476IncompleteBC054007transcription factor B1, mitochondrial

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_057104  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_016020 NP_057104 Q8WVM0 RrnaAD

Related Sequences

 
mRNAGenPeptSwissProt
AF151833 AAD34070 Q8WVM0
BC005183 AAH05183 Q8WVM0
BC017788 AAH17788 Q8WVM0
DQ891970 ABM82896  
DQ895159 ABM86085  
AK289484 BAF82173 A8K0B9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TFB1M NP_057104 R.norvegicus Tfb1m 308140   NP_852139 87
M.musculus Tfb1m 224481 Gene Info NP_666186 86
A.gambiae AgaP_AGAP012129 1280551   XP_320403 52
D.melanogaster CG42630 39320   NP_648499 51
C.elegans T03F1.7 188022   NP_491242 44

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)