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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. DDX5, DEAD (Asp-Glu-Ala-Asp) box helicase 5
Sequence ID:NM_004396
Entrez Gene ID:1655
Ensembl ID:ENSG00000108654

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:17q21Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 62496040 - 62502237

 Exon Info From UCSC:
NM_004396

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3528578Full LengthBC016027DEAD (Asp-Glu-Ala-Asp) box polypeptide 5

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_004387  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_004396 NP_004387 P17844 EC 3.6.4.13 DEAD
Helicase_C
P68HR

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC016027 AAH16027 P17844 EC 3.6.4.13
BT006943 AAP35589 P17844 EC 3.6.4.13
DQ890687 ABM81613    
DQ893774 ABM84700    
AB209919 BAD93156 Q59E92  
AK297192 BAG59680 B4DLW8  
AK297753 BAG60103 B4DN41  
AK297905 BAG60224 B4DNG2  
AB451257 BAG70071 P17844 EC 3.6.4.13
AB451382 BAG70196 B5BUE6  
X15729 CAA33751 P17844 EC 3.6.4.13
X52104 CAA36324 P17844 EC 3.6.4.13
BX571764 CAE11890 Q7Z2V5  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens DDX5 NP_004387 M.musculus Ddx5 13207 Gene Info NP_031866 99
R.norvegicus Ddx5 287765   NP_001007614 99
N.crassa NCU07839 3879108   XP_962960 61
A.gambiae AgaP_AGAP012045 1280623   XP_320481 58
S.cerevisiae DBP2 855611   NP_014287 58
S.pombe dbp2 2541383   NP_596523 58
D.melanogaster CG10777 31707   NP_572424 56

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta