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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CHMP4A, charged multivesicular body protein 4A
Sequence ID:NM_014169
Entrez Gene ID:29082
Ensembl ID:ENSG00000254505

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:14q12Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:14: 24679029 - 24682671

NM_014169 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
33552467878824679140
3564912467955324679688
4926062467985924679973
6077842468062024680797
7859342468088524681034
93515052468261424683184

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8322585Full LengthBC113533chromatin modifying protein 4A
8322587Full LengthBC113535chromatin modifying protein 4A
4295071IncompleteBC010893chromatin modifying protein 4A
6457205IncompleteBC107699chromatin modifying protein 4A

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_054888  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_014169 NP_054888   ESCRT-III

Related Sequences

 
mRNAGenPeptSwissProt
AF161483 AAF29098 Q9BY43
BC010893 AAH10893 Q9BY43
BC107699 AAI07700 Q9BY43
BC113533 AAI13534 Q14D22
BC113535 AAI13536 Q14D22
AF212243 AAK14928 Q9BY43
AY329084 AAQ91193 Q9BY43
HQ258138 ADR82892  
AB100262 BAC79376 Q9BY43

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CHMP4A NP_054888 A.thaliana SNF7.1 829037   NP_001078468 41

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)