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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TRPV2, Transient receptor potential cation channel, subfamily V, member 2
Sequence ID:NM_016113
Entrez Gene ID:51393
Ensembl ID:ENSG00000187688

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17p11.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 16319089 - 16340250

 Exon Info From UCSC:
NM_016113

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4298484Full LengthBC018926transient receptor potential cation channel, subfamily V, member 2
4870010Full LengthBC051305transient receptor potential cation channel, subfamily V, member 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_057197  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_016113 NP_057197 Q9Y5S1 Ank
Ion_trans

Related Sequences

 
mRNAGenPeptSwissProt
AF129112 AAD26363 Q9Y5S1
AF103906 AAD41724 Q9Y5S1
BC018926 AAH18926 Q9Y5S1
BC051305 AAH51305 Q9Y5S1
DQ893607 ABM84533  
DQ895145 ABM86071  
AK289705 BAF82394 Q9Y5S1
AK001896 BAG50989 B3KMH7
AJ487963 CAD32310 Q9Y5S1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TRPV2 NP_057197 M.musculus Trpv2 22368 Gene Info NP_035836 82
R.norvegicus Trpv2 29465   NP_058903 79

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)