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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SFRP5, secreted frizzled-related protein 5
Sequence ID:NM_003015
Entrez Gene ID:6425
Ensembl ID:ENSG00000120057

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:10q24.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:10: 99526517 - 99531772

NM_003015 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
311109952650999527616
111111889952942499529501
118918839953106199531755

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6189478Full LengthBC050435secreted frizzled-related protein 5

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003006  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_003015 NP_003006 Q5T4F7 Fz
NTR

Related Sequences

 
mRNAGenPeptSwissProt
AF017988 AAB70794 Q5T4F7
AF117758 AAD25052 Q5T4F7
BC050435 AAH50435 Q5T4F7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SFRP5 NP_003006 M.musculus Sfrp5 54612 Gene Info NP_061250 96
R.norvegicus Sfrp5 309377   NP_001101061 95

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)