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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CCDC41, coiled-coil domain containing 41
Sequence ID:NM_001042399
NM_016122
Entrez Gene ID:51134
Ensembl ID:ENSG00000173588

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:12q22Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 94702061 - 94853481

 Exon Info From UCSC:
NM_001042399
NM_016122

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40117807Full LengthBC125087coiled-coil domain containing 41
6621591IncompleteBC107746coiled-coil domain containing 41
40117806IncompleteBC125086coiled-coil domain containing 41

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001042399 NP_001035858    
NM_016122 NP_057206 Q9Y592  

Related Sequences

 
mRNAGenPeptSwissProt
AF155115 AAD42881 Q9Y592
BC107746 AAI07747 Q3B787
BC125086 AAI25087 Q9Y592
BC125087 AAI25088 Q9Y592

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CCDC41 NP_001035858 R.norvegicus Ccdc41 366872   NP_001014288 86
M.musculus Ccdc41 77048 Gene Info NP_084128 84

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)